If you are beginning work with or publishing data generated by the initiatives, please feel free to contact original sample submitters in the work or include any members of the...
All consortium members have agreed to the data policy and communications policy set at the inception of the program.
The Australian Microbiome has a strong interest in seeing that...
Following user feedback, the AM now provides two amplicon sequence abundance data types,
denoised amplicon sequence variants (ASV) or zero radius operational taxonomic units (zOTU)...
The Australian Microbiome has a strong interest in seeing that the data and capability produced by the initiative is actively communicated to and used by the wider community both...
Amplicon Target Organism / Gene
Primers
Sample Type
Bacteria / 16SrRNA
27f / 591r...
The consortium involves several organisations and researchers from more than 40 institutions:
Atlas of Living Australia
Australian Institute of Marine Science...
Base Contextual Data Matrix
Additional resources on the Australian Microbiome initiative
Australian Microbiome Framework initiative webpage
Australian Microbiome Framework initiative Twitter feed...
Access collection site map...
BASE Methods
General Methods
Sample Collection
Soil chemistry methods
DNA Extraction
Bioinformatic Analysis
Metagenomic Sequencing
Amplicon methods and...
Access processed data search facility
The...
Project Contacts
Dr Sophie Mazard
Project Manager
Bioplatforms Australia Ltd
Level 4, Bldg 4WW, Research Park Drive
Macquarie University, NSW, 2109, Australia
Phone: +61 2 9850...
Raes, E. J., Bodrossy, L., van de Kamp, J., Bissett, A., Ostrowski, M., Brown, M. V., & Waite, A. M. et al. (2018). Oceanographic boundaries constrain microbial diversity gradients in...
Search Facility Page
The search facility allows users to access secondary data, in the form of gene abundance tables for each amplicon and site specific metadata. Amplicons available for...
Contextual Data Matrix
View or download contextual data for all samples
Search facility...
