13700_D0W52ACXX_TGACCA_L003_R2.fastq.gz
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Additional Information
Field | Value |
---|---|
Data last updated | August 4, 2016 |
Metadata last updated | August 4, 2016 |
Created | August 4, 2016 |
Format | FASTQ |
License | No License Provided |
File size | 2.1G |
Filename | 13700_D0W52ACXX_TGACCA_L003_R2.fastq.gz |
Flowcell | D0W52ACXX |
Id | 5cecb796981b6912e5f5ddb333f5de52 |
Index number | 4 |
Lane number | 3 |
Md5 | 5cecb796981b6912e5f5ddb333f5de52 |
Note | { "row": 49, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13700", "official_variety": "39023", "kingdom": "Bacteria", "phylum": "Proteobacteria", "species": "Pseudomonas fluorescens", "sample_id": 39023.0, "other_id": "BRIP39023a", "original_source_host_species": "Triticum aestivum", "collection_date": 32416.0, "collection_location": "Bauhinia Downs, QLD", "wheat_pathogenicity": "not observed", "contact_scientist": "Donald Gardiner", "sample_dna_source": "Liquid culture", "dna_extraction_protocol": "QIAgen Blood and Tissue kit", "library": "PE", "library_construction": 485.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "4250_4", "library_id": 39023.0, "index_number": null, "index_sequence": "TGACCA", "run_number": 223.0, "flow_cell_id": "D0W52ACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13700_D0W52ACXX_TGACCA_L003_R2.fastq.gz", "sequence_filetype": null, "md5_checksum": "5cecb796981b6912e5f5ddb333f5de52", "file_size": "2.1G", "analysis_performed": "assembled and annotated", "genbank_project": "", "locus_tag": "", "genome_analysis": "", "metdata_file": "39023-metadata.txt" } |
On same domain | True |
Package id | 102.100.100.13700 |
Resource type | wheat-pathogens |
Run index number | 4 |
Run lane number | 3 |
Run number | 223 |
Run protocol | Illumina TruSeq DNA Sample Preparation |
Run protocol base pairs | 485 |
Run protocol library type | PE |
S3 etag verified at | 7 years ago |
S3etag 8388608 | a20c10b33fa8a87400b10cc8fea730a3-268 |
Sequencer | Illumina HiSeq 2000 |
Sha256 | 99583c27bd71b67de0a51496c6f7316ec8d4f2af2c4c00d70b00a68ee1a5c31e |
Size | 2 GiB |
State | active |
Url type | upload |
MD5 | 5cecb796981b6912e5f5ddb333f5de52 |
SHA256 | 99583c27bd71b67de0a51496c6f7316ec8d4f2af2c4c00d70b00a68ee1a5c31e |
File size (bytes) | 2241608254 |
S3 E-Tag (8MB multipart) | a20c10b33fa8a87400b10cc8fea730a3-268 |
S3 E-Tag (16MB multipart) | |
S3 E-Tag (32MB multipart) | |
S3 E-Tag (64MB multipart) | |
S3 E-Tag (128MB multipart) | |
S3 E-Tag Verified At | 2017-12-12T22:08:46.576554 |
file_size | 2.1G |
flowcell | D0W52ACXX |
index_number | 4.0 |
lane_number | 3.0 |
resource_path | |
resource_type | wheat-pathogens |
run_index_number | 4.0 |
run_lane_number | 3.0 |
run_number | 223.0 |
run_protocol | Illumina TruSeq DNA Sample Preparation |
run_protocol_base_pairs | 485.0 |
run_protocol_library_type | PE |
sequencer | Illumina HiSeq 2000 |