Australian Microbiome Amplicons 16S 102.100.100/404296 M76WY
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This dataset is currently under a short embargo period until December 25, 2025 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:90:am-consortium-members |
| Access Control Date | 2025-12-25 |
| Access Control Mode | date |
| Sequence Data Type | illumina-amplicons |
| am_environment | Marine |
| amplicon | 16S |
| analysis_software | Local Run Manager |
| analysis_software_version | 4.1.0 |
| analytical_platform | MiSeq |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/amd/amplicons-miseq/16s/BPAOPS-1910/20250822_AM_16S_UNSW_M76WY/ |
| biotic_relationship | Free-living |
| ccg_jira_ticket | BPAOPS-1910 |
| coastal_id | WQR134_D0 |
| collection_date | 2025-02-12T23:17:00 |
| comments | 404296_16S_M76WY_CTAGCGAA-GTCTAGTG |
| data_type | 16S |
| database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx |
| date_of_transfer | 2025-09-26 |
| date_of_transfer_to_archive | 2025-09-26 |
| depth (m) | 0.0 |
| depth_lower (m) | 0.0 |
| depth_upper (m) | 0.0 |
| description | MiSeq data package |
| dilution_used | neat |
| dna_concentration_submitter (ng/μL) | 26.0 |
| env_broad_scale | 7 Other |
| env_medium | Sea water [ENVO_00002149] |
| flow_id | M76WY |
| folder_name | 20250822_AM_16S_UNSW_M76WY |
| funding_agency | AIMS; CSIRO; IMOS |
| general_env_feature | Marine - neritic (coastal off shore) |
| geo_loc_name | Australia:Great Barrier Reef [GAZ_00009717] |
| imos_site_code | CSGNI |
| index | CTAGCGAA-GTCTAGTG |
| lat_lon (decimal_degrees) | -16.7767 145.9583 |
| latitude (decimal_degrees) | -16.7767 |
| longitude (decimal_degrees) | 145.9583 |
| omics | Genomics |
| pass_fail | P |
| reads | 54075.0 |
| samp_size (L) | 2.0 |
| samp_vol_we_dna_ext (L) | 2.0 |
| sample_attribution | Great Barrier Reef Marine Monitoring Program for Inshore Water Quality; AIMS; CSIRO; IMOS |
| sample_database_file | AM_db_v4.2_202508201559.db |
| sample_id | 102.100.100/404296 |
| sample_metadata_ingest_date | 2025-08-20 15:59:21 |
| sample_metadata_ingest_file | coastal_stations_metadata_mapping_JV14082025update_FullREPLACE_csv |
| sample_site_location_description | Green Island |
| sample_submitter | Yun Kit Yeoh[y.yeoh@aims.gov.au;https://orcid.org/0000-0003-0241-6117]|David G. Bourne[david.bourne@jcu.edu.au;https://orcid.org/0000-0002-1492-8710] |
| sample_type | Coastal water |
| sequencing_facility | Ramaciotti |
| target | 16S |
| ticket | BPAOPS-1910 |
| url | https://www.ncbi.nlm.nih.gov/biosample/?term=102.100.100/404296 |
| utc_date_sampled | 2025-02-12 |
| utc_time_sampled | 23:17:00 |