Australian Microbiome Amplicons 16S 102.100.100/405452 M76WY
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This dataset is currently under a short embargo period until December 25, 2025 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
This dataset has no data
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:90:am-consortium-members |
| Access Control Date | 2025-12-25 |
| Access Control Mode | date |
| Sequence Data Type | illumina-amplicons |
| am_environment | Marine |
| amplicon | 16S |
| analysis_software | Local Run Manager |
| analysis_software_version | 4.1.0 |
| analytical_platform | MiSeq |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/amd/amplicons-miseq/16s/BPAOPS-1910/20250822_AM_16S_UNSW_M76WY/ |
| biotic_relationship | Free-living |
| ccg_jira_ticket | BPAOPS-1910 |
| collection_date | 2025-02-07T00:00:00 |
| comments | 405452_16S_M76WY_AAGGAGCG-TCTACACT |
| data_type | 16S |
| database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx |
| date_of_transfer | 2025-09-26 |
| date_of_transfer_to_archive | 2025-09-26 |
| description | MiSeq data package |
| dilution_used | neat |
| dna_concentration_submitter (ng/μL) | 8.54 |
| dna_concentration_submitter_meth | meth_3.3.3 |
| env_broad_scale | 7 Other |
| env_local_scale | 7.2.1 Open ocean water-conservation |
| env_medium | Sea water [ENVO_00002149] |
| flow_id | M76WY |
| folder_name | 20250822_AM_16S_UNSW_M76WY |
| funding_agency | IMOS|CSIRO |
| general_env_feature | Marine - neritic (coastal off shore) |
| geo_loc_name | Australia:Great Barrier Reef Marine Park [GAZ_00049080] |
| imos_site_code | NRSYON |
| index | AAGGAGCG-TCTACACT |
| lat_lon (decimal_degrees) | -19.3085 147.6184 |
| latitude (decimal_degrees) | -19.3085 |
| longitude (decimal_degrees) | 147.6184 |
| nrs_sample_code | YON20250207_26 |
| nrs_trip_code | YON20250207 |
| omics | Genomics |
| pass_fail | P |
| reads | 49454.0 |
| sample_attribution | IMOS|CSIRO |
| sample_database_file | AM_db_v4.2_202508201559.db |
| sample_id | 102.100.100/405452 |
| sample_metadata_ingest_date | 2025-08-20 15:59:43 |
| sample_metadata_ingest_file | national_reference_stations_metadata_mapping_JV14082025_FullREPLACE_csv |
| sample_site_location_description | Yongala |
| sample_submitter | Jodie van de Kamp [https://orcid.org/0000-0003-2167-0938] |
| sample_type | Pelagic |
| sequencing_facility | Ramaciotti |
| target | 16S |
| ticket | BPAOPS-1910 |
| url | https://www.ncbi.nlm.nih.gov/biosample/?term=102.100.100/405452 |
| utc_date_sampled | 2025-02-07 |