Sepsis Genomics Pacbio 25728
Dataset size is: 9.39 GiB
Data and Resources
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only GZ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only FASTA
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only GZ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only GZ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only GZ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only FASTA
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only FASTQ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only FASTQ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only FASTA
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only GZ
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25728_SEP_UNSW_PAC_m160802_05213... Metadata Only FASTQ
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| analytical_facility | Ramaciotti |
| archive_ingestion_date | 2016-08-17 |
| cell_position | F01 |
| contact_researcher | Dick Strugnell |
| contextual_data_submission_date | 2016-05-07 |
| culture_collection_date | ethics embargo |
| data_generated | True |
| data_type | Main dataset |
| experimental_replicate | 1 |
| experimental_sample_preparation_method | Phenol-chloroform; Phase-lock gel tubes |
| facility | RAMACIOTTI |
| gram_stain | NEG |
| growth_condition_media | Luria broth |
| growth_condition_notes | Luria agar for streaking (from glycerol) then overnight in Luria broth |
| growth_condition_temperature | 37.0 |
| growth_condition_time_(h) | Overnight growth |
| growth_media | Luria broth |
| host_age | ethics embargo |
| host_disease_outcome | ethics embargo |
| host_dob | ethics embargo |
| host_location | ethics embargo |
| host_sex | ethics embargo |
| insert_size_range | 15-50kb |
| isolation_source | ethics embargo |
| key_virulence_genes | ethics embargo |
| library_construction_protocol | 20kb template prep_blue pippin |
| omics | Genomics |
| replicate | 1 |
| rs_version | RS Remote v2.3 |
| sample_id | 102.100.100/25728 |
| sample_submission_date | 2016-05-07 |
| sequencer | PacBio RSII |
| sequencer_run_id | m160802_052137 |
| smrt_cell_id | c101035012550000001823252711171604 |
| strain_description | ethics embargo |
| strain_or_isolate | KPC2 |
| taxon_or_organism | Klebsiella pneumoniae |
| ticket | BRLOPS-846 |
| work_order | Work order 6 |