Sepsis Genomics Pacbio 25767

ARP Genomics Pacbio Raw Data: Escherichia coli MS14385 Luria broth Replicate 1

Dataset size is: 4.35 GiB

Log in or Register to access resource
 
 

 

Data and Resources

Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member
analytical_facility Ramaciotti
archive_ingestion_date 2016-09-15
cell_position A01
contact_researcher Steven Djordjevic
contextual_data_submission_date 2016-07-20
culture_collection_id E. coli strain 2009-25
data_generated True
data_type Main dataset
experimental_replicate 1
experimental_sample_preparation_method MoBio genomic DNA extraction kit
facility RAMACIOTTI
gram_stain NEG
growth_condition_media Luria broth
growth_condition_temperature 37.0
growth_condition_time_(h) Overnight growth
growth_media Luria broth
host_age 72
host_disease_outcome Urosepsis
host_location New South Wales, Australia (Sydney Adventist Hospital)
host_sex M
insert_size_range 15-50kb
isolation_source Blood
key_virulence_genes Multi-drug resistant extended-spectrum beta lactamase producer. Carries a copper resistance operon and hlyE. Paired urine isolate available.
library_construction_protocol 20kb template prep_blue pippin
omics Genomics
replicate 1
rs_version RS Remote v2.3
sample_id 102.100.100/25767
sample_submission_date 2016-07-16
sequencer PacBio RSII
sequencer_run_id m160913_080542_42272
smrt_cell_id c101094862550000001823234702241740
strain_description ST648
strain_or_isolate MS14385
taxon_or_organism Escherichia coli
ticket BPAOPS-15
work_order Work order 2