ARP Proteomics SwathMS 51016
Dataset size is: 1.40 GiB
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| analytical_platform | SWATH-MS |
| archive_ingestion_date | 2018-07-18 |
| contact_researcher | Steven Djordjevic |
| contextual_data_submission_date | 2017-11-14 |
| culture_collection_id | E. coli strain 2013-13 |
| data_generated | True |
| data_type | Main dataset |
| facility | APAF |
| gradient_time_per_acn | 600nL/min, 2% to 10% B, 10 min, 10% B to 35% B, 78 min |
| gram_stain | NEG |
| growth_condition_growth_phase | N/A |
| growth_condition_media | Pooled sera |
| growth_condition_od600_reading | N/A |
| growth_condition_temperature | 37.0 |
| growth_condition_time_(h) | 2 hrs exposure to sera |
| growth_media | Pooled sera |
| host_location | New South Wales, Australia (Sydney Adventist Hospital) |
| isolation_source | Blood |
| key_virulence_genes | Carries a copper resistance operon and hlyE. Putative resistance to five antibiotic classes. Phylogroup B2 |
| lc_column_type | Eksigent Ultra nanoLC system (Eksigent), Halo C18, 100 mm × 150 µm, 160Å, 2.7 µm |
| mass_spectrometer | 6600 Triple TOF |
| omics | Proteomics |
| peptide_resuspension_protocol | Tip-probe sonicate 2x 30s in solvent intended for injection (e.g 90% MeCN/0.1% TFA) |
| replicate | 2 |
| sample_id | 102.100.100/51016 |
| sample_submission_date | 2017-11-13 |
| sample_type | HLB-cleaned dried peptides |
| strain_description | ST224 |
| strain_or_isolate | MS14386 |
| taxon_or_organism | Escherichia coli |
| ticket | BPAOPS-644 |
| treatment | 10mM DTT, 20mM IAA, 1:25µg trypsin 37C 24h |