ARP Proteomics SwathMS 51595
Dataset size is: 2.43 GiB
Data and Resources
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| analytical_platform | SWATH-MS |
| archive_ingestion_date | 2019-01-30 |
| contact_researcher | Dick Strugnell |
| contextual_data_submission_date | 2018-08-17 |
| culture_collection_date | 2001-12-05 |
| data_generated | True |
| data_type | Main dataset |
| facility | APAF |
| gradient_time_per_acn | 600nL/min, 2% to 10% B, 10 min, 10% B to 35% B, 78 min |
| gram_stain | NEG |
| growth_condition_growth_phase | Mid log phase |
| growth_condition_media | RPMI |
| growth_condition_od600_reading | 4.87 |
| growth_condition_temperature | 37.0 |
| growth_condition_time_(h) | 1 hr |
| growth_media | RPMI |
| host_age | 44 |
| host_disease_outcome | Community-acquired urinary tract infection |
| host_location | Victoria, Australia (Alfred Hospital, Melbourne) |
| host_sex | F |
| isolation_source | Urine (mid stream) |
| lc_column_type | Eksigent Ultra nanoLC system (Eksigent), Halo C18, 100 mm × 150 µm, 160Å, 2.7 µm |
| mass_spectrometer | 6600 Triple TOF |
| omics | Proteomics |
| peptide_resuspension_protocol | Tip-probe sonicate 2x 30s in solvent intended for injection (e.g 90% MeCN/0.1% TFA) |
| replicate | 3 |
| sample_id | 102.100.100/51595 |
| sample_submission_date | 2018-08-21 |
| sample_type | HLB-cleaned peptides |
| serovar | K0 |
| strain_or_isolate | AJ055 |
| taxon_or_organism | Klebsiella variicola |
| ticket | BPAOPS-778 |
| treatment | 10mM DTT, 20mM IAA, 1:25µg trypsin 37C 24h |