ARP Transcriptomics Hiseq 50324

ARP Transcriptomics Hiseq Raw Data: Streptococcus pneumoniae 4496 RPMI + galactose Replicate 4

Dataset size is: 1.62 GiB

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Data and Resources

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Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member
analytical_platform HiSeq
archive_ingestion_dates 21/12/2017
barcode_tag AGCGATAG-AGGCGAAG
casava_version bcl2fastq v2.20.0.422
contact_researcher James Paton/Richard Harvey
contextual_data_submission_date 2017-10-31
culture_collection_date 1988-06-07
data_generated True
data_type Main dataset
facility AGRF
flow_cell_ids CC1K3ANXX, CC2K5ANXX
gram_stain POS
growth_condition_growth_phase Mid log phase
growth_condition_media Mid log phase
growth_condition_od600_reading 0.25
growth_media RPMI + galactose
host_location Victoria, Australia (Melbourne)
host_sex M
isolation_source Blood
key_virulence_genes Low hemolytic Ply
library_construction_protocol TruSeq stranded RNA with Ribo-Zero Bacteria
omics Transcriptomics
publication_reference Infect. Immun. 79(1):4122-30 (2011)
replicate 4
sample 50852_1
sample_id 102.100.100/50324
sample_submission_date 2017-10-31
sample_type RNA
sequencer HiSeq 2500
serovar 1
strain_description Highly virulent in animal models (ST3018)
strain_or_isolate 4496
taxon_or_organism Streptococcus pneumoniae
ticket BPAOPS-445