Murray River turtle, Reference Genome, ONT-promethion, liver
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:ausarg-consortium-members |
| Access Control Date | 2022-07-16 |
| Access Control Mode | date |
| Sequence Data Type | ont-promethion |
| analysis_software | MinKNOW Core, Bream, Guppy |
| analysis_software_version | MinKNOW Core 4.0.5, Bream 6.0.10, Guppy 4.0.11 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/ausarg_staging/promethion/BPAOPS-1111/20210714_PAG86924_AusARG_RamaciottiGarvan_350823/ |
| class | Reptilia |
| common_name | Murray River turtle |
| data_context | Reference Genome |
| data_custodian | Arthur Georges |
| data_type | ONT-promethion |
| dataset_id | 102.100.100/351770 |
| dataset_url | not sure of the order of the datasets |
| date_of_transfer | 2021-07-16 |
| date_of_transfer_to_archive | 2021-07-17 |
| description | PromethION |
| experimental_design | ONT PromethION |
| facility_sample_id | PUXP140363 |
| family | Chelidae |
| fast5_compression | zlib |
| flowcell_id | PAG86924 |
| flowcell_type | FLO-PRO002 |
| folder_name | 20210714_PAG86924_AusARG_RamaciottiGarvan_350823 |
| genus | Emydura |
| library_construction_protocol | SQK-RAD004 |
| library_id | 102.100.100/350823 |
| library_location | Garvan Institute of Medical Research |
| library_prep_date | 2021-06-16 |
| library_prepared_by | Jillian Hammond |
| library_source | GENOMIC |
| library_strategy | WGS |
| metadata_revision_date | 2023-03-14 |
| metadata_revision_filename | AusARG_Metadata_master_QCIF_20230314.xlsx |
| model_base_caller | High-accuracy basecalling |
| order | Testudines |
| phylum | Chordata |
| sample_custodian | Arthur Georges |
| sample_id | 102.100.100/349814 |
| sequencing_facility | Ramaciotti/Garvan |
| sequencing_model | PromethION |
| sequencing_platform | OXFORD_NANOPORE |
| species | macquarii |
| specimen_id | AA062704 |
| subspecies | NA |
| taxon_id | 90392 |
| ticket | BPAOPS-1111 |
| tissue_number | AA062712 |
| tissue_type | liver |
| voucher_or_tissue_number | AA062712 |