BASE Amplicons ITS 19447_1 BKG34
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
| Sequence Data Type | illumina-amplicons |
| am_environment | Soil |
| amplicon | ITS |
| analysis_software_version | 2.6.2.3 |
| archive_ingestion_date | 2018-01-31 |
| base_amplicon_linkage | BKG34 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/temp_amd/base/raw/amplicons/its/ramaciotti/BPAOPS-500/ |
| collection_date | 2013-01-04 |
| comments | 19447_1_ITS_UNSW_CGCCAAAT_CGTCGCTA_BKG34 |
| conductivity (dS/m) | 0.144 |
| data_generated | 2018-01-31 |
| data_type | MiSeq ITS |
| database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/2.0.2/db_schema_definitions/db_schema_definitions.xlsx |
| dataset_url | https://downloads.bioplatforms.com/bpa/base/raw/amplicons/its/ramaciotti/BPAOPS-500/ |
| date_of_transfer | 2018-01-31 |
| depth (m) | 0.0 |
| depth_lower (m) | 0.1 |
| depth_upper (m) | 0.0 |
| description | BASE |
| dilution | 2x |
| elev (m) | 14.9702997 |
| env_broad_scale | 1 Conservation and Natural Environments |
| env_local_scale | 1.1.2 Wilderness area |
| facility | RAMACIOTTI |
| facility_code | ramaciotti |
| flow_id | BKG34 |
| folder_name | 20180131_UNSW_BPA_BASE_BKG34 |
| general_env_feature | Polar |
| geo_loc_name | Australia |
| gravel (%) | 23.22523937 |
| lat_lon (decimal_degrees) | -68.57952948 78.00455532 |
| latitude (decimal_degrees) | -68.57952948 |
| local_class | LatLon out of range |
| longitude (decimal_degrees) | 78.00455532 |
| ncbi_bioproject_accession | PRJNA317932 |
| ncbi_biosample_accession | SAMN07488502 |
| organic_carbon (%) | 0.1249 |
| pcr_1_to_10 | F |
| pcr_neat | F |
| ph_solid_h2o | 9.7 |
| phosphorus_colwell (mg/kg) | 9.5 |
| read_length | 300bp |
| reads | 1011 |
| sample_database_file | AM_db_v2_202105280954.db |
| sample_extraction_id | 19447_1 |
| sample_id | 102.100.100/19447 |
| sample_metadata_ingest_date | 2021-04-23_00:00:00 |
| sample_metadata_ingest_file | BASE_NEW_CKAN_Curated_depth_xlsx |
| sample_metadata_update_history | soil_types_20210420_xlsx; |
| sample_site_location_description | HV/T1/200m |
| sample_submission_date | 2018-01-31 |
| sample_type | Soil |
| sand (%) | 62.07893671 |
| silt (%) | 14.69582392 |
| slope_aspect (direction_or_degrees) | 75.1352997 |
| slope_gradient (%) | 1.13651 |
| source_mat_id | 102.100.100/19447 |
| store_cond | Frozen |
| target | ITS |
| ticket | BPAOPS-500 |
| url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/19447 |
| utc_date_sampled | 2013-01-04 |
| water_content (%) | 4.139486737 |