reference genome, illumina-transcriptomics
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Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2025-09-27 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1695/20240927_FUN_AGRF_CAGRF24060051_22T2YGLT3/ |
| bioplatforms_dataset_id | 102.100.100/467802 |
| bioplatforms_library_id | 102.100.100/466451 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/464451 |
| ccg_jira_ticket | BPAOPS-1695 |
| data_context | reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2024-09-27 |
| date_of_transfer_to_archive | 2024-10-01 |
| facility_project_code | CAGRF24060051 |
| facility_sample_id | 17105-3 |
| flow_cell_id | 22T2YGLT3 |
| flowcell_id | 22T2YGLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20240927_FUN_AGRF_CAGRF24060051_22T2YGLT3 |
| insert_size_range | 396.0 |
| library_construction_protocol | Illumina Stranded Total RNA w Ribo-Zero Plus (WTS) |
| library_id | 466451 |
| library_index_seq_dual | UDP0337-F & UDP0337-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 26.1 |
| library_oligo_sequence_dual | TGTAAGGTGG-AAGGCCTTGG |
| library_pcr_cycles | 13.0 |
| library_prepared_by | MB |
| library_source | RNA |
| library_strategy | Total RNAseq |
| library_type | illumina-transcriptomics |
| project_lead | Caterina Selva |
| sample_id | CLIN_002_Mycelia_RNA |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| specimen_id | CLIN_002 |
| ticket | BPAOPS-1695 |
| work_order | 21003 |