reference genome, illumina-transcriptomics
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Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2025-09-27 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1694/20240927_FUN_AGRF_CAGRF24080319_22T5WLLT3/ |
| bioplatforms_dataset_id | 102.100.100/467803 |
| bioplatforms_library_id | 102.100.100/466452 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/464449 |
| ccg_jira_ticket | BPAOPS-1694 |
| data_context | reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2024-09-27 |
| date_of_transfer_to_archive | 2024-10-01 |
| facility_project_code | CAGRF24080319 |
| facility_sample_id | 17402-1 |
| flow_cell_id | 22T5WLLT3 |
| flowcell_id | 22T5WLLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20240927_FUN_AGRF_CAGRF24080319_22T5WLLT3 |
| insert_size_range | 368.0 |
| library_construction_protocol | Illumina Stranded mRNA (RNA-Seq) |
| library_id | 466452 |
| library_index_seq_dual | UDP0088-F & UDP0088-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 137.0 |
| library_oligo_sequence_dual | GGAGCGTGTA-ATCCGTAAGT |
| library_pcr_cycles | 13.0 |
| library_prep_date | 2024-08-30 |
| library_prepared_by | JM |
| library_source | RNA |
| library_strategy | mRNA seq |
| library_type | illumina-transcriptomics |
| project_lead | Caterina Selva |
| sample_id | ENV_001_Mycelia_RNA |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| specimen_id | ENV_001 |
| ticket | BPAOPS-1694 |
| work_order | 21012 |