reference genome, illumina-transcriptomics

CLIN_001_Mycelia_RNA, Caterina Selva

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Data and Resources

This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members
Access Control Date 2025-09-27
Access Control Mode date
Sequence Data Type illumina-shortread
analysis_software NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3
base_url https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1694/20240927_FUN_AGRF_CAGRF24080319_22T3J7LT3/
bioplatforms_dataset_id 102.100.100/467803
bioplatforms_library_id 102.100.100/466453
bioplatforms_project Australian Functional Fungi Initiative
bioplatforms_sample_id 102.100.100/464450
ccg_jira_ticket BPAOPS-1694
data_context reference genome
data_type Illumina-shortread
date_of_transfer 2024-09-27
date_of_transfer_to_archive 2024-10-01
facility_project_code CAGRF24080319
facility_sample_id 17402-2
flow_cell_id 22T3J7LT3
flowcell_id 22T3J7LT3
flowcell_type 10B-300
folder_name 20240927_FUN_AGRF_CAGRF24080319_22T5WLLT3
insert_size_range 384.0
library_construction_protocol Illumina Stranded mRNA (RNA-Seq)
library_id 466453
library_index_seq_dual UDP0089-F & UDP0089-R
library_location AGRF Melbourne
library_ng_ul 73.5
library_oligo_sequence_dual GTCCGTAAGC-CGTGTATCTT
library_pcr_cycles 13.0
library_prep_date 2024-08-30
library_prepared_by JM
library_source RNA
library_strategy mRNA seq
library_type illumina-transcriptomics
project_lead Caterina Selva
sample_id CLIN_001_Mycelia_RNA
sequencing_facility AGRF
sequencing_kit_chemistry_version XLEAP SBS
sequencing_model X Plus
sequencing_platform NovaSeq
specimen_id CLIN_001
ticket BPAOPS-1694
work_order 21012