reference genome, illumina-transcriptomics
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This dataset is currently under a short embargo period until September 27, 2025 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:fungi-consortium-members |
| Access Control Date | 2025-09-27 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/fungi_staging/illumina-shortread/BPAOPS-1694/20240927_FUN_AGRF_CAGRF24080319_22T5WLLT3/ |
| bioplatforms_dataset_id | 102.100.100/467803 |
| bioplatforms_library_id | 102.100.100/466453 |
| bioplatforms_project | Australian Functional Fungi Initiative |
| bioplatforms_sample_id | 102.100.100/464450 |
| ccg_jira_ticket | BPAOPS-1694 |
| data_context | reference genome |
| data_type | Illumina-shortread |
| date_of_transfer | 2024-09-27 |
| date_of_transfer_to_archive | 2024-10-01 |
| facility_project_code | CAGRF24080319 |
| facility_sample_id | 17402-2 |
| flow_cell_id | 22T5WLLT3 |
| flowcell_id | 22T5WLLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20240927_FUN_AGRF_CAGRF24080319_22T5WLLT3 |
| insert_size_range | 384.0 |
| library_construction_protocol | Illumina Stranded mRNA (RNA-Seq) |
| library_id | 466453 |
| library_index_seq_dual | UDP0089-F & UDP0089-R |
| library_location | AGRF Melbourne |
| library_ng_ul | 73.5 |
| library_oligo_sequence_dual | GTCCGTAAGC-CGTGTATCTT |
| library_pcr_cycles | 13.0 |
| library_prep_date | 2024-08-30 |
| library_prepared_by | JM |
| library_source | RNA |
| library_strategy | mRNA seq |
| library_type | illumina-transcriptomics |
| project_lead | Caterina Selva |
| sample_id | CLIN_001_Mycelia_RNA |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | XLEAP SBS |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| specimen_id | CLIN_001 |
| ticket | BPAOPS-1694 |
| work_order | 21012 |