GAP Illumina short read, Phylogenomics, 134542, Angiosperms353 bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2024-03-16 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | Illumina BCL2fastq |
| bait_set_name | Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1364/ |
| ccg_jira_ticket | BPAOPS-1364 |
| country | Australia |
| data_type | Pilot (FSP) |
| dataset_id | 134773 |
| date_data_published | 22/3/23 |
| date_of_transfer | 2023-03-17 |
| date_of_transfer_to_archive | 2023-03-20 |
| decimal_latitude_public | -12.758333 |
| decimal_longitude_public | 143.111667 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1364 |
| facility | BRF |
| family | Lamiaceae |
| flow_cell_id | H5TT7DRX3 |
| folder_name | 20230316_GAP_BRF_standard_H5TT7DRX3 |
| genomic_material_prepared_by | CSIRO |
| herbarium_code | NSW |
| id_vetting_by | A.A. Munir |
| id_vetting_date | 1989-02-01 |
| latitude | -12.758333 |
| library_construction_protocol | NEB DNA Ultra II FS with Angio 353 capture |
| library_id | 134742 |
| longitude | 143.111667 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| project_aim | Phylogenomics |
| run_format | SP flowcell with XP splitter 300 cycles (150 PE) |
| sample_id | 102.100.100/134542 |
| sample_submitter_email | Trevor.C.Wilson@rbgsyd.nsw.gov.au |
| sample_submitter_name | Trevor Wilson |
| scientific_name | Clerodendrum costatum |
| scientific_name_authorship | R.Br. |
| scientific_name_notes | ML note: Standard library (prepared by BRF) |
| sequencer | Novaseq 6000 |
| silica_gel | Yes |
| silica_gel_id | NSW 1115691 |
| silica_gel_pressed_sheet | Yes |
| state_or_territory | NSW |
| ticket | BPAOPS-1364 |
| voucher_herbarium_catalog_number | NSW2127517 |
| voucher_herbarium_collector_id | P. Hind |
| voucher_herbarium_event_date | 1973-08-19 |
| voucher_herbarium_record_number | 270 |