GAP Illumina short read, Phylogenomics, 376426, OzBaits bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-07-20 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.624.3.10.8 |
| bait_set_name | OzBaits bait kit |
| bait_set_reference | 10.1101/2021.09.06.456727 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1304/20220719_GAP_NGS_AGRF_CAGRF21088075_HGLJNDRX2/ |
| ccg_jira_ticket | BPAOPS-1304 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83705 |
| date_data_published | 20/07/2022 |
| date_of_transfer | 2022-07-20 |
| date_of_transfer_to_archive | 2022-07-20 |
| decimal_latitude_public | -34.496402 |
| decimal_longitude_public | 137.481418 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1304 |
| facility | AGRF |
| family | Cymodoceaceae |
| flow_cell_id | HGLJNDRX2 |
| folder_name | 20220719_GAP_NGS_AGRF_CAGRF21088075_HGLJNDRX2 |
| genomic_material_prepared_by | AGRF (June 2022) |
| herbarium_code | AD |
| id_vetting_by | M Waycott |
| id_vetting_date | 2022-05-17 |
| latitude | -34.496402 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits OzBaits Capture |
| library_id | 380744 |
| longitude | 137.481418 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Yes |
| nagoya_protocol_permit_number | G25787-3 |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/376426 |
| sample_submission_date | 2022-06-16 |
| sample_submitter_email | michelle.waycott@adelaide.edu.au |
| sample_submitter_name | Michelle Waycott |
| scientific_name | Amphibolis griffithii |
| scientific_name_authorship | (J.M.Black) Hartog |
| sequencer | NovaSeq 6000 |
| state_or_territory | SA |
| ticket | BPAOPS-1304 |
| voucher_herbarium_catalog_number | AD283592 |
| voucher_herbarium_collector_id | KJ van Dijk, S Caddi-Retalic |
| voucher_herbarium_event_date | 2016-11-19 |
| voucher_herbarium_record_number | GIBS 1803 |