GAP Illumina short read, Phylogenomics, 376541, OzBaits bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-06-27 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.609.3.9.3 |
| bait_set_name | OzBaits bait kit |
| bait_set_reference | 10.1101/2021.09.06.456727 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1291/20220627_GAP_NGS_AGRF_CAGRF220310074_HGLW3DRX2/ |
| ccg_jira_ticket | BPAOPS-1291 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83706 |
| date_data_published | 28/06/2022 |
| date_of_transfer | 2022-06-27 |
| date_of_transfer_to_archive | 2022-06-27 |
| decimal_latitude_public | -19.7820733993 |
| decimal_longitude_public | 125.2010720762 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1291 |
| facility | AGRF |
| family | Droseraceae |
| flow_cell_id | HGLW3DRX2 |
| folder_name | 20220627_GAP_NGS_AGRF_CAGRF220310074_HGLW3DRX2 |
| genomic_material_prepared_by | AGRF (May2022) |
| herbarium_code | AD |
| id_vetting_by | R.L. Taplin |
| id_vetting_date | 2008-12-03 |
| latitude | -19.7820733993 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits Angiosperm 353 Capture |
| library_id | 380907 |
| longitude | 125.2010720762 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/376541 |
| sample_submission_date | 2022-05-18 |
| sample_submitter_email | michelle.waycott@adelaide.edu.au |
| sample_submitter_name | Michelle Waycott |
| scientific_name | Drosera petiolaris |
| scientific_name_authorship | DC. |
| scientific_name_notes | This specimen is not Drosera petiolaris DC.. The sample was identified as Drosera sp. ? petiolaris by R.L.Taplin, however it does not match a described species in the Drosera petiolaris complex (14 spp.). Another individual from the same sheet has been sequenced with OzBaits. Results from that analysis putatively indicate that this sample may be an undescribed and early diverging member of the complex. |
| sequencer | NovaSeq 6000 |
| state_or_territory | Western Australia |
| ticket | BPAOPS-1291 |
| voucher_herbarium_catalog_number | AD 98223503Y |
| voucher_herbarium_collector_id | W.K. Harris |
| voucher_herbarium_event_date | 1982-04-30 |
| voucher_herbarium_record_number | Harris, W.K. 47 |