GAP Illumina short read, Phylogenomics, 376556, OzBaits bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-06-27 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.609.3.9.3 |
| bait_set_name | OzBaits bait kit |
| bait_set_reference | 10.1101/2021.09.06.456727 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1291/20220627_GAP_NGS_AGRF_CAGRF220310074_HGLW3DRX2/ |
| ccg_jira_ticket | BPAOPS-1291 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83706 |
| date_data_published | 28/06/2022 |
| date_of_transfer | 2022-06-27 |
| date_of_transfer_to_archive | 2022-06-27 |
| decimal_latitude_public | -15.0 |
| decimal_longitude_public | 145.0 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1291 |
| facility | AGRF |
| family | Droseraceae |
| flow_cell_id | HGLW3DRX2 |
| folder_name | 20220627_GAP_NGS_AGRF_CAGRF220310074_HGLW3DRX2 |
| genomic_material_prepared_by | AGRF (May2022) |
| herbarium_code | AQ |
| id_vetting_by | M.T. Mathieson |
| id_vetting_date | 2020-11-01 |
| latitude | -15.0 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits Angiosperm 353 Capture |
| library_id | 380922 |
| longitude | 145.0 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_permit_number | Collected by BRI |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/376556 |
| sample_submission_date | 2022-05-18 |
| sample_submitter_email | michelle.waycott@adelaide.edu.au |
| sample_submitter_name | Michelle Waycott |
| scientific_name | Drosera buubugujin |
| scientific_name_authorship | M.T.Mathieson |
| scientific_name_notes | Recently described species not yet accepted by APC, see Mathieson & Thompson (2020) "Drosera buubugujin M.T.Mathieson (Droseraceae, Drosera section Prolifera C.T.White), a spectacular new species of sundew from the Cape York Peninsula bioregion". Species closely resembles Drosera schizandra Diels. with some morphological differences. This species is narrowly endemic, geographically isolated and likely critically endangered. |
| sequencer | NovaSeq 6000 |
| state_or_territory | Queensland |
| ticket | BPAOPS-1291 |
| voucher_herbarium_catalog_number | AQ 856868 |
| voucher_herbarium_collector_id | S.L. Thompson |
| voucher_herbarium_event_date | 2015-12-16 |
| voucher_herbarium_record_number | SLT15127 |