GAP Illumina short read, Phylogenomics, 376903, OzBaits bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-04-28 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.609.3.9.3 |
| bait_set_name | OzBaits bait kit |
| bait_set_reference | 10.1101/2021.09.06.456727 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1233/20220428_GAP_NGS_AGRF_CAGRF21088080_H77W5DRX2/ |
| ccg_jira_ticket | BPAOPS-1233 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83710 |
| date_data_published | 29/4/22 |
| date_of_transfer | 2022-04-28 |
| date_of_transfer_to_archive | 2022-04-28 |
| decimal_latitude_public | -28.5917 |
| decimal_longitude_public | 115.6042 |
| description | Illumina Short Read |
| dna_extract | Yes |
| dna_extract_pressed_sheet | Independent silica collection made at time of voucher collection. |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1233 |
| facility | AGRF |
| family | Myrtaceae |
| flow_cell_id | H77W5DRX2 |
| folder_name | 20220428_GAP_NGS_AGRF_CAGRF21088080_H77W5DRX2 |
| herbarium_code | NSW |
| latitude | -28.5917 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits OzBaits Capture |
| library_id | 381701 |
| location_id | 11 km S of Mullewa on the Morawa road. |
| longitude | 115.6042 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/376903 |
| sample_submission_date | 2022-04-04 |
| sample_submitter_email | michelle.waycott@adelaide.edu.au |
| sample_submitter_name | Michelle Waycott |
| scientific_name | Malleostemon tuberculatus |
| scientific_name_authorship | J.W.Green |
| sequencer | NovaSeq 6000 |
| state_or_territory | Western Australia |
| ticket | BPAOPS-1233 |
| voucher_herbarium_catalog_number | NSW448519 |
| voucher_herbarium_collector_id | Wilson, G. Peter |
| voucher_herbarium_event_date | 2000-11-19 |
| voucher_herbarium_record_number | 1530 |