GAP Illumina short read, Phylogenomics, 377395, Angiosperms353 bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-08-12 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.624.3.10.8 |
| bait_set_name | Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1310/20220812_GAP_NGS_AGRF_CAGRF21088035_HKM5FDRX2/ |
| ccg_jira_ticket | BPAOPS-1310 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83694 |
| date_data_published | 15/08/2022 |
| date_of_transfer | 2022-08-12 |
| date_of_transfer_to_archive | 2022-08-14 |
| decimal_latitude_public | -26.52 |
| decimal_longitude_public | 151.13 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1310 |
| facility | AGRF |
| family | Fabaceae |
| flow_cell_id | HKM5FDRX2 |
| folder_name | 20220812_GAP_NGS_AGRF_CAGRF21088035_HKM5FDRX2 |
| genomic_material_prepared_by | AGRF (Jun 2022) |
| herbarium_code | NSW |
| id_vetting_by | James Clugston |
| id_vetting_date | 2022-03-15 |
| latitude | -26.52 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits Angiosperm 353 Capture |
| library_id | 382193 |
| location_notes | 28 km (17.4 miles) by road SSW of Durong South towards Jandowae. |
| longitude | 151.13 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/377395 |
| sample_submission_date | 2022-06-21 |
| sample_submitter_email | james.clugston@rbgsyd.nsw.gov.au |
| sample_submitter_name | James Clugston |
| scientific_name | Pultenaea petiolaris |
| scientific_name_authorship | A.Cunn. ex Benth. |
| scientific_name_notes | at the time of sample submission the determination of this voucher was Pultenaea bracteamajor de Kok, however, we do not agree with the current determination and identify this voucher as Pultenaea petiolaris. |
| sequencer | NovaSeq 6000 |
| silica_gel | no |
| silica_gel_pressed_sheet | Yes |
| state_or_territory | Qld |
| ticket | BPAOPS-1310 |
| voucher_herbarium_catalog_number | NSW424455 |
| voucher_herbarium_collector_id | Coveny, R.G. |
| voucher_herbarium_event_date | 1975-08-28 |
| voucher_herbarium_record_number | 6778 |
| voucher_herbarium_recorded_by | Coveny, R.G.|Hind, P.D. |