GAP Illumina short read, Phylogenomics, 377416, Angiosperms353 bait kit
Dataset size is: 0.00 Bit
Data and Resources
This dataset has no data
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-08-12 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.624.3.10.8 |
| bait_set_name | Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1310/20220812_GAP_NGS_AGRF_CAGRF21088035_HKM5FDRX2/ |
| ccg_jira_ticket | BPAOPS-1310 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83694 |
| date_data_published | 15/08/2022 |
| date_of_transfer | 2022-08-12 |
| date_of_transfer_to_archive | 2022-08-14 |
| decimal_latitude_public | -37.033333 |
| decimal_longitude_public | 149.75 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1310 |
| facility | AGRF |
| family | Fabaceae |
| flow_cell_id | HKM5FDRX2 |
| folder_name | 20220812_GAP_NGS_AGRF_CAGRF21088035_HKM5FDRX2 |
| genomic_material_prepared_by | AGRF (Jun 2022) |
| herbarium_code | CANB |
| id_vetting_by | James Clugston |
| id_vetting_date | 2022-03-15 |
| latitude | -37.033333 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits Angiosperm 353 Capture |
| library_id | 382214 |
| living_collections_catalog_number | 749584.0 |
| living_collections_event_date | 2021-08-04 |
| living_collections_record_number | 749584.0 |
| living_collections_recorded_by | Tamera Beath |
| location_notes | South East Forest National Park; Sugarloaf Mountain, c. 3 km SE from Ben Boyd Road along Sugarloaf Road. |
| longitude | 149.75 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/377416 |
| sample_submission_date | 2022-06-21 |
| sample_submitter_email | james.clugston@rbgsyd.nsw.gov.au |
| sample_submitter_name | James Clugston |
| scientific_name | Pultenaea benthamii |
| scientific_name_authorship | F.Muell. |
| sequencer | NovaSeq 6000 |
| silica_gel | Yes |
| silica_gel_id | 749584.0 |
| silica_gel_pressed_sheet | silica sample collected from living collection |
| state_or_territory | NSW |
| ticket | BPAOPS-1310 |
| voucher_herbarium_catalog_number | CANB 749584.1 |
| voucher_herbarium_collector_id | Corbett, S.R. |
| voucher_herbarium_event_date | 2007-05-09 |
| voucher_herbarium_record_number | 321 |
| voucher_herbarium_recorded_by | Corbett, S.R. |