GAP Illumina short read, Phylogenomics, 378128, Angiosperms353 bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-06-27 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.5 and Real Time Analysis (RTA) v3.4.4, DRAGEN BCL Convert 07.021.609.3.9.3 |
| bait_set_name | Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1290/20220627_GAP_NGS_AGRF_CAGRF220310080_HGLW3DRX2/ |
| ccg_jira_ticket | BPAOPS-1290 |
| country | Australia |
| data_type | Main dataset (AATOL Stage 2) |
| dataset_id | 83690 |
| date_data_published | 28/06/2022 |
| date_of_transfer | 2022-06-27 |
| date_of_transfer_to_archive | 2022-06-27 |
| decimal_latitude_public | -37.708611037 |
| decimal_longitude_public | 140.650556 |
| description | Illumina Short Read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1290 |
| facility | AGRF |
| family | Droseraceae |
| flow_cell_id | HGLW3DRX2 |
| folder_name | 20220627_GAP_NGS_AGRF_CAGRF220310080_HGLW3DRX2 |
| genomic_material_prepared_by | AGRF (May2022) |
| herbarium_code | AD |
| id_vetting_by | R.L. Taplin |
| id_vetting_date | 2014-02-17 |
| latitude | -37.708611037 |
| library_construction_protocol | NEBNext Ultra II FS DNA Library Prep with MyBaits Angiosperm 353 Capture |
| library_id | 382937 |
| longitude | 140.650556 |
| metadata_revision_date | 2023-09-14 |
| metadata_revision_filename | 2023-09-07_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/378128 |
| sample_submission_date | 2022-05-18 |
| sample_submitter_email | michelle.waycott@adelaide.edu.au |
| sample_submitter_name | Michelle Waycott |
| scientific_name | Drosera gracilis |
| scientific_name_authorship | Hook.f. ex Planch. |
| scientific_name_notes | Treated as a synonym of Drosera peltata Thunb. by CHAH. Species boundaries within the D. peltata complex are currently unclear, with some authors, e.g. Lowrie et al 2017, "Drosera of the world" and Lowrie 2013, "Carnivorous plants of Australia Magnum Opus: Volume 2" treating D. gracilis as a species, while others consider it nested within D. peltata. Drosera gracilis is found using APC search but the name is not included in the APC. Drosera gracilis is accepted by Kew Plants of the World search. |
| sequencer | NovaSeq 6000 |
| state_or_territory | South Australia |
| ticket | BPAOPS-1290 |
| voucher_herbarium_catalog_number | AD 265695 |
| voucher_herbarium_collector_id | D.E. Murfet |
| voucher_herbarium_event_date | 2013-11-03 |
| voucher_herbarium_record_number | D.E.Murfet 7630 |