GAP Illumina short read, Phylogenomics, 79652, Angiosperms353 bait kit

Epitriche demissus (A.Gray) P.S.Short, Asteraceae, Alexander Schmidt-Lebuhn | CSIRO

Dataset size is: 0.00 Bit

Log in or Register to access resource
 
 

 

Data and Resources

Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member
Sequence Data Type illumina-shortread
analysissoftwareversion Illumina RTA v2.11.3, Illumina bcl2fastq v2.20.0.422
bait_set_name Angiosperms353 bait kit
bait_set_reference 10.1093/sysbio/syy086
base_url https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-931/
ccg_jira_ticket BPAOPS-931
data_type Pilot
dataset_id 83650
date_of_transfer 25/06/2020
date_of_transfer_to_archive 08/07/2020
description Illumina Short Read
download https://data.bioplatforms.com/organization/bpa-plants?q=ticket%3ABPAOPS-931&sort=score+desc%2C+metadata_modified+desc
facility AGRF
family Asteraceae
flow_cell_id HF7CKAFX2
folder_name 20200625_GAP_AGRF_HF7CKAFX2 (Angio353 - except Korjent data)
genomic_material_associated_references Not yet published
genomic_material_preparation_materials Invisorb Spin Plant Mini Kit
genomic_material_preparation_process (The TDWG page does not appear to provide any guidance on what information is desired in this column. The process was DNA extraction.)
genomic_material_preparation_type gDNA from leaf tissue
genomic_material_prepared_by Jessica Bovill | CSIRO
herbarium_code CANB
id_vetting_by Alexander Schmidt-Lebuhn
library_construction_protocol (The TDWG page does not appear to provide any guidance on what information is desired in this column. The process was DNA extraction.), Angio353 MyBaits
library_id 81665
living_collections_catalog_number Not applicable
living_collections_record_number Not applicable
living_collections_recorded_by Not applicable
nagoya_protocol_compliance Yes
nagoya_protocol_permit_number SW014934 and CE003649 (DEC, WA)
project_aim Phylogenomics
sample_id 102.100.100/79652
sample_submitter_email alexander.s-l@csiro.au
sample_submitter_name Alexander Schmidt-Lebuhn | CSIRO
scientific_name Epitriche demissus
scientific_name_authorship (A.Gray) P.S.Short
sequencer NextSeq 500
ticket BPAOPS-931
voucher_herbarium_catalog_number CANB 812966
voucher_herbarium_collector_id Alexander Schmidt-Lebuhn
voucher_herbarium_event_date 2012-09-16
voucher_herbarium_record_number Schmidt-Lebuhn 1471
voucher_herbarium_recorded_by Alexander Schmidt-Lebuhn