GAP Illumina short read, Phylogenomics, 79697, Angiosperms353 bait kit
Dataset size is: 0.00 Bit
Data and Resources
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
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79697_LibID81767_HF7CKAFX2_TAGTG... Metadata Only FASTQ
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | Illumina RTA v2.11.3, Illumina bcl2fastq v2.20.0.422 |
| bait_set_name | Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-931/ |
| ccg_jira_ticket | BPAOPS-931 |
| data_type | Pilot |
| dataset_id | 83650 |
| date_of_transfer | 25/06/2020 |
| date_of_transfer_to_archive | 08/07/2020 |
| description | Illumina Short Read |
| dna_extract | Yes |
| dna_extract_pressed_sheet | Yes |
| download | https://data.bioplatforms.com/organization/bpa-plants?q=ticket%3ABPAOPS-931&sort=score+desc%2C+metadata_modified+desc |
| facility | AGRF |
| family | Asparagaceae |
| flow_cell_id | HF7CKAFX2 |
| folder_name | 20200625_GAP_AGRF_HF7CKAFX2 (Angio353 - except Korjent data) |
| genomic_material_associated_references | Nil |
| genomic_material_preparation_date | 2017-07-13 |
| genomic_material_preparation_materials | Qiagen DNeasy Plant Mini Kit, custom library preparation protocol, custom adapters/barcodes |
| genomic_material_preparation_process | QIAGEN DNA extraction, mechanical DNA shearing, custom adapter ligation, custom barcode ligation |
| genomic_material_preparation_type | gDNA, whole genome shotgun sequencing |
| genomic_material_prepared_by | Bee Gunn | Royal Botanic Garden Melbourne |
| herbarium_code | PERTH |
| id_vetting_by | Dr Joanne L. Birch |
| library_construction_protocol | QIAGEN DNA extraction, mechanical DNA shearing, custom adapter ligation, custom barcode ligation, Angio353 MyBaits |
| library_id | 81767 |
| living_collections_recorded_by | Not applicable |
| nagoya_protocol_compliance | Pre-Nagoya |
| nagoya_protocol_permit_number | Not known |
| project_aim | Phylogenomics |
| sample_id | 102.100.100/79697 |
| sample_submitter_email | bee.gunn@rbg.vic.gov.au | joanne.birch@unimelb.edu.au |
| sample_submitter_name | Bee Gunn | Joanne L. Birch |
| scientific_name | Acanthocarpus canaliculatus |
| scientific_name_authorship | A.S. George |
| sequencer | NextSeq 500 |
| silica_gel | No |
| silica_gel_pressed_sheet | Yes |
| ticket | BPAOPS-931 |
| voucher_herbarium_catalog_number | PERTH 7790716 |
| voucher_herbarium_collector_id | Phillips, L.A. |
| voucher_herbarium_event_date | 2007-09-07 |
| voucher_herbarium_record_number | 73 |
| voucher_herbarium_recorded_by | Bee Gunn |