GAP Illumina short read, Phylogenomics, 79761, Duplicate - Angiosperms353 bait kit
Dataset size is: 0.00 Bit
Data and Resources
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
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79761_LibID81940_H7LV7AFX2_CGGTT... Metadata Only FASTQ
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:gap-consortium-members |
| Access Control Date | 2021-09-11 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | Illumina RTA v2.11.3, Illumina bcl2fastq v2.20.0.422 |
| bait_set_name | Duplicate - Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1064/20200909_GAP_AGRF_H7LV7AFX2/ |
| ccg_jira_ticket | BPAOPS-1064 |
| data_type | Pilot |
| dataset_id | 83650 |
| date_data_published | 28/04/2021 |
| date_of_transfer | 2020-09-11 |
| date_of_transfer_to_archive | 2020-09-15 |
| description | Illumina Short Read |
| dna_extract | Yes |
| dna_extract_pressed_sheet | Yes |
| download | https://data.bioplatforms.com/dataset?q=ticket%3ABPAOPS-1064 |
| facility | AGRF / Kor-jent van Dijk |
| family | Juncaginaceae |
| flow_cell_id | H7LV7AFX2 |
| folder_name | 20200909_GAP_AGRF_H7LV7AFX2 (Angio353 duplicate - Korjent data only) |
| genomic_material_associated_references | Nil |
| genomic_material_preparation_date | 2019-10-21 |
| genomic_material_preparation_materials | custom library preparation protocol, custom adapters/barcodes |
| genomic_material_preparation_process | LGC sbeadex oKtopure |
| genomic_material_preparation_type | gDNA, whole genome shotgun sequencing |
| genomic_material_prepared_by | Kor-jent van Dijk |
| herbarium_code | AD |
| id_vetting_by | John Conran | University of Adelaide |
| library_construction_protocol | LGC sbeadex oKtopure, Duplicate - Angiosperms353 MyBaits |
| library_id | 81940 |
| living_collections_catalog_number | not applicable |
| living_collections_record_number | not applicable |
| living_collections_recorded_by | not applicable |
| metadata_revision_date | 2025-10-14 |
| metadata_revision_filename | 2025-10-15_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Pre-Nagoya |
| preservation_temperature | -20°C |
| preservation_type | DNA |
| project_aim | Phylogenomics |
| sample_id | 102.100.100/79761 |
| sample_submitter_email | korjent.vandijk@adelaide.edu.au |
| sample_submitter_name | Kor-jent van Dijk | Michelle Waycott | University of Adelaide |
| scientific_name | Triglochin striata |
| scientific_name_authorship | Ruiz & Pav. |
| scientific_name_notes | sample received as Triglochin striatum |
| sequencer | NextSeq 500 |
| silica_gel | no |
| ticket | BPAOPS-1064 |
| voucher_herbarium_catalog_number | Voucher herbarium catalog number not recorded |
| voucher_herbarium_collector_id | John Conran |
| voucher_herbarium_record_number | record number not recorded |