GAP Illumina short read, Phylogenomics, 80001, Angiosperms353 bait kit
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422 |
| bait_set_name | Angiosperms353 bait kit |
| bait_set_reference | 10.1093/sysbio/syy086 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1060/20210413_GAP_AGRF_H3GYVDSX2/ |
| ccg_jira_ticket | BPAOPS-1060 |
| data_type | Main dataset |
| dataset_id | 83654 |
| date_data_published | 15/4/2021 |
| date_of_transfer | 13/04/2021 |
| date_of_transfer_to_archive | 13/4/2021 |
| description | Illumina Short Read |
| dna_extract | No - Plant Material sent to AGRF for DNA extraction |
| facility | AGRF |
| family | Orchidaceae |
| flow_cell_id | H3GYVDSX2 |
| folder_name | 20210413_GAP_NGS_AGRF_H3GYVDSX2 |
| genomic_material_preparation_process | Qiagen DNeasy 96 Plant Kit |
| genomic_material_preparation_type | gDNA |
| genomic_material_prepared_by | AGRF (Nov - Dec 2020) |
| herbarium_code | QRS |
| id_vetting_by | Bruce Gray |
| id_vetting_date | 2000-10-14 |
| library_construction_protocol | NEBNext Ultra II DNA with MyBaits Angio353 Capture |
| library_id | 82192 |
| nagoya_protocol_compliance | pre nagoya |
| project_aim | Phylogenomics |
| run_format | 150PE |
| sample_id | 102.100.100/80001 |
| sample_submission_date | 2020-11-24 |
| sample_submitter_email | mark.clements@csiro.au |
| sample_submitter_name | Mark Clements |
| scientific_name | Tainia trinervis |
| scientific_name_authorship | (Blume) Rchb.f. |
| sequencer | NovaSeq 6000 |
| ticket | BPAOPS-1060 |
| voucher_herbarium_catalog_number | 121008 |
| voucher_herbarium_collector_id | B.Gray |
| voucher_herbarium_event_date | 2000-10-14 |
| voucher_herbarium_record_number | 7841 |