Portuguese millipede, PacBio-HiFi, PacBio-HiFi, whole body
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This dataset is currently under a short embargo period until September 12, 2026 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:bpa-ipm-consortium-members |
| Access Control Date | 2026-09-12 |
| Access Control Mode | date |
| Sequence Data Type | pacbio-hifi |
| altitude | 27.0 |
| ancillary_notes | NA |
| associated_media | NA |
| bait_set_name | NA |
| bait_set_reference | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/ipm_staging/pacbio-hifi/BPAOPS-1900/20250911_IPM_AGRF_CAGRF25060078_m84073_250902_043737_s4/ |
| bioplatforms_dataset_id | 607801 |
| bioplatforms_library_id | 102.100.100/606221 |
| bioplatforms_project | Integrated Pest Management ‘Omics Initiative (IPM OMICS) |
| bioplatforms_sample_id | 102.100.100/603970 |
| ccg_jira_ticket | BPAOPS-1900 |
| cell_postion | D01 |
| class | Diplopoda |
| collection_date | 2025-05-01 |
| collection_method | hand capture |
| collection_permit | yes |
| collector | Marta Karolak |
| collector_sample_id | OMMO118 |
| common_name | Portuguese millipede |
| country | Australia |
| data_context | Reference genome |
| data_type | PacBio-HiFi |
| date_of_transfer | 2025-09-12 |
| date_of_transfer_to_archive | 2025-09-15 |
| decimal_latitude_public | -34.9990783 |
| decimal_longitude_public | 138.5473753 |
| depth | NA |
| description | PacBio-HiFi |
| dna_treatment | SHEARING |
| env_broad_scale | ENVO_01000174 |
| env_local_scale | ENVO_01000198 |
| env_medium | ENVO_01000155 |
| experimental_design | NA |
| facility | AGRF |
| facility_project_code | CAGRF25060078 |
| facility_sample_id | 606221.0 |
| family | Julidae |
| fast5_compression | NA |
| flowcell_id | m84073_250902_043737_s4 |
| flowcell_type | SMRT Cell 25M |
| folder_name | 20250911_IPM_AGRF_CAGRF25060078_m84073_250902_043737_s4 |
| genotypic_sex | unknown |
| genus | Ommatoiulus |
| habitat | mixed forest |
| health_state | unknown |
| host_common_name | NA |
| host_family | NA |
| host_organ | NA |
| host_scientific_name | NA |
| host_status | NA |
| host_symptom | NA |
| identified_by | Marta Karolak |
| indigenous_location | Nunga |
| insert_size_range | 12000.0 |
| isolate | millipede |
| latitude | -34.9990783 |
| library_comments | NA |
| library_construction_protocol | Preparing whole genome and metagenome libraries using SMRTbell® prep kit 3.0 |
| library_index_id | NA |
| library_index_id_dual | NA |
| library_index_seq_dual | NA |
| library_index_sequence | NA |
| library_layout | NA |
| library_location | AGRF |
| library_ng_ul | 325pM |
| library_oligo_sequence | NA |
| library_oligo_sequence_dual | NA |
| library_pcr_cycles | NA |
| library_pcr_reps | NA |
| library_prep_date | 2025-08-07 |
| library_prepared_by | Trent Peters |
| library_selection | size fractionation |
| library_source | GENOMIC |
| library_strategy | WGS |
| library_type | PacBio-HiFi |
| lifestage | adult organism |
| location_info_restricted | No |
| location_text | Oaklands Estate Reserve |
| longitude | 138.5473753 |
| material_extracted_by | AGRF |
| material_extraction_type | DNA |
| metadata_revision_date | 2025-09-08 |
| metadata_revision_filename | IPM_Metadata_Combined_PORTAL_NOLATLONG_20250908.xlsx |
| model_base_caller | NA |
| movie_length | 30Hrs |
| n_libraries_pooled | 4.0 |
| order | Julida |
| phylum | Arthropoda |
| project_lead | Brenton von Takach |
| sample_collection_type | field sample |
| sample_custodian | Brenton von Takach |
| sample_id | OMMO118 |
| sample_id_description | Curtin University |
| sample_quality | excellent |
| sample_type | whole specimen |
| scientific_name | Ommatoiulus |
| scientific_name_authorship | Lucas,1860 |
| scientific_name_note | NA |
| sequencing_facility | AGRF |
| sequencing_kit_chemistry_version | Revio SPRQ sequencing plate |
| sequencing_model | PacBio Revio |
| sequencing_platform | PACBIO_SMRT |
| source_population | NA |
| species | moreletii |
| specimen_id | OMMO118 |
| specimen_id_description | Curtin University |
| state_or_region | South Australia |
| sub_species | NA |
| taxon_id | 1008864 |
| taxonomic_group | millipede |
| temperature | unkown |
| ticket | BPAOPS-1900 |
| tissue | whole body |
| tissue_preservation | dry ice, -80C |
| tissue_preservation_temperature | -80.0 |
| type_status | NA |
| wild_captive | wild |
| work_order | 24015 |