Marine Microbes Amplicons 18S 102.100.100/34863 AWMVL
Dataset size is: 38.66 MiB
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
| Sequence Data Type | illumina-amplicons |
| alkalinity (μmol/kg) | 2283.0 |
| am_environment | Marine |
| ammonium (μmol/L) | 0.217463685 |
| amplicon | 18S |
| analysis_software_version | 2.6.2.3 |
| analytical_platform | MiSeq |
| archive_ingestion_date | 2016-10-18 |
| chlorophyll_a (mg/m3) | 0.3561768 |
| coastal_id | MagneticIsland_Geoffrey Bay |
| collection_date | 2016-06-08 |
| comments | 34863_1_18S_UNSW_GTAGAGGA_GTAAGGAG_AWMVL |
| contextual_data_submission_date | 2016-08-16 |
| data_generated | 2016-10-18 |
| data_type | 18S |
| dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/18s/ramaciotti/BPAOPS-33/ |
| date_of_transfer | 2016-10-17 |
| depth (m) | 2.0 |
| depth_lower (m) | 2.0 |
| depth_upper (m) | 2.0 |
| description | MM |
| dilution_used | neat |
| env_medium | Sea water [ENVO_00002149] |
| facility | RAMACIOTTI |
| flow_id | AWMVL |
| folder_name | 20161017_UNSW_BPA_MM_AWMVL |
| geo_loc_name | Australia: Queensland: Magnetic Island:Geoffrey Bay |
| lat_lon (decimal_degrees) | -19.154109 146.6426 |
| latitude (decimal_degrees) | -19.154109 |
| longitude (decimal_degrees) | 146.6426 |
| microbial_abundance (cells/mL) | 672900.0 |
| mm_amplicon_linkage | AWMVL |
| nitrate_nitrite (μmol/L) | 0.369389805 |
| nitrite (μmol/L) | 0.023796617 |
| npic (mg/L) | 0.104788758 |
| npoc (mg/L) | 1.345453256 |
| omics | Genomics |
| part_org_carb (μmol/L) | 12.62850403 |
| pass_fail | P |
| phosphate (μmol/L) | 0.097781823 |
| pn (μmol/L) | 1.50151911 |
| read_length | 250bp |
| reads | 118634.0 |
| salinity_lab (PSU) | 35.6875 |
| sample_database_file | AM_db_v2_202105131603.db |
| sample_extraction_id | 34863_1 |
| sample_id | 102.100.100/34863 |
| sample_metadata_ingest_date | 2021-04-23_00:00:00 |
| sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx |
| sample_site_location_description | Geoffrey Bay |
| sample_submission_date | 2016-10-17 |
| sample_submitter | Bettina Glasl |
| sample_type | Coastal water |
| sio2 (μmol/L) | 3.381461896 |
| source_mat_id | 102.100.100/34863 |
| submitter | Bettina Glasl |
| target | 18S |
| temp (degC) | 23.8387 |
| ticket | BPAOPS-33 |
| total_co2 (μmol/kg) | 1987.3 |
| tss (mg/L) | 0.715 |
| url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/34863 |
| utc_date_sampled | 2016-06-08 |
| utc_time_sampled | 12:00:00 |
| work_order | 10 |