Marine Microbes Amplicons A16S 102.100.100/21649 AHYFU
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
| Sequence Data Type | illumina-amplicons |
| alkalinity (μmol/kg) | 2325.89 |
| alkalinity_meth | 2.2 |
| am_environment | Marine |
| ammonium (μmol/L) | 0.1 |
| ammonium_meth | 2.2 |
| amplicon | A16S |
| analysis_software_version | 2.6.2.3 |
| analytical_platform | MiSeq |
| archive_ingestion_date | 2015-01-01 |
| biotic_relationship | Free-living |
| collection_date | 2014-02-05 |
| comments | 21649_AHYFU |
| contextual_data_submission_date | 2015-09-30 |
| data_generated | 2015-01-01 |
| data_type | A16S |
| dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/a16s/ramaciotti/BPAOPS-364/ |
| date_of_transfer | 2015-01-01 |
| depth (m) | 0.0 |
| depth_lower (m) | 0.0 |
| depth_upper (m) | 0.0 |
| description | MM |
| dilution_used | neat |
| env_broad_scale | 7 Other |
| env_local_scale | 7.2.1 Open ocean water-conservation |
| env_medium | Sea water [ENVO_00002149] |
| facility | RAMACIOTTI |
| flow_id | AHYFU |
| folder_name | 20171020_UNSW_EXTERNAL_BPAOPS364 |
| funding_agency | IMOS; CSIRO |
| general_env_feature | Marine - neritic (coastal off shore) |
| geo_loc_name | Australia:Maria Island |
| imos_site_code | NRSMAI |
| inorganic_fraction (mg/L) | 0.1 |
| inorganic_fraction_meth | 2.2 |
| lat_lon (decimal_degrees) | -42.59667 148.23333 |
| latitude (decimal_degrees) | -42.59667 |
| longitude (decimal_degrees) | 148.23333 |
| mm_amplicon_linkage | AHYFU |
| nitrate (μmol/L) | 0.1 |
| nitrate_meth | 2.2 |
| nrs_sample_code | NRSMAI20140205_000 |
| nrs_trip_code | MAI20140205 |
| nucl_acid_ext | 3.1.9 |
| omics | Genomics |
| organic_fraction (mg/L) | 0.45 |
| organic_fraction_meth | 2.2 |
| oxygen (μmol/L) | 254.1 |
| oxygen_meth | 2.2 |
| pass_fail | P |
| phosphate (μmol/L) | 0.13 |
| phosphate_meth | 2.2 |
| picoeukaryotes (cells/mL) | 6279.0 |
| picoeukaryotes_meth | 2.2int |
| prochlorococcus (cells/mL) | 935.0 |
| prochlorococcus_meth | 2.2int |
| read_length | 300bp |
| salinity_lab (PSU) | 35.285 |
| salinity_lab_meth | 2.2 |
| samp_collect_device | 1.4 |
| samp_mat_process | 1.4 |
| sample_attribution | IMOS; CSIRO |
| sample_database_file | AM_db_v2_202105131603.db |
| sample_extraction_id | 21649_1 |
| sample_id | 102.100.100/21649 |
| sample_metadata_ingest_date | 2021-04-23_00:00:00 |
| sample_metadata_ingest_file | Curated_NRS_AM_CombinedWaterQuality_download090321_with_watercolumn120321_xlsx |
| sample_site_location_description | Maria Island |
| sample_submission_date | 2015-01-01 |
| sample_submitter | Jodie van de Kamp |
| sample_type | Pelagic |
| secchi_depth (m) | 17.0 |
| secchi_depth_meth | 2.2 |
| silicate (μmol/L) | 0.5 |
| silicate_meth | 2.2 |
| source_mat_id | 102.100.100/21649 |
| store_cond | 1.4 |
| submitter | Jodie van de Kamp |
| target | A16S |
| ticket | BPAOPS-364 |
| tot_depth_water_col (m) | 86.0 |
| total_co2 (μmol/kg) | 2067.02 |
| total_co2_meth | 2.2 |
| tss (mg/L) | 0.5 |
| tss_meth | 2.2 |
| url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/21649 |
| utc_date_sampled | 2014-02-05 |
| utc_time_sampled | 00:05:00 |
| work_order | 1 |
| zooplankton_biomass (mg/m3) | 21.86546 |
| zooplankton_biomass_meth | 2.2int |