Marine Microbes Amplicons A16S 102.100.100/27027 AHWU6

Maria Island, A16S MiSeq

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Map tiles & Data by OpenStreetMap, under CC BY SA.
Resource Permissions organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members
Sequence Data Type illumina-amplicons
alkalinity (μmol/kg) 2314.88
alkalinity_meth 2.2
allo (mg/m3) 0.004
allo_meth 2.2
alpha_beta_car (mg/m3) 0.019
alpha_beta_car_meth 2.2
am_environment Marine
ammonium (μmol/L) 0.54
ammonium_meth 2.2
amplicon A16S
analysis_software_version 2.6.2.3
analytical_platform MiSeq
anth (mg/m3) 0.0
anth_meth 2.2
archive_ingestion_date 2015-01-01
asta (mg/m3) 0.0
asta_meth 2.2
biotic_relationship Free-living
but_fuco (mg/m3) 0.006
but_fuco_meth 2.2
cantha (mg/m3) 0.0
cantha_meth 2.2
chlorophyll_a (mg/m3) 0.664
chlorophyll_a_meth 2.2
chlorophyll_b (mg/m3) 0.029
chlorophyll_b_meth 2.2
chlorophyll_c1 (mg/m3) 0.0
chlorophyll_c1_meth 2.2
chlorophyll_c2 (mg/m3) 0.098
chlorophyll_c2_meth 2.2
chlorophyll_c3 (mg/m3) 0.054
chlorophyll_c3_meth 2.2
collection_date 2012-10-17
comments 27027_AHWU6
cphlide_a (mg/m3) 0.095
cphlide_a_meth 2.2
data_generated 2015-01-01
data_type A16S
dataset_url https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/a16s/ramaciotti/BPAOPS-364/
date_of_transfer 2015-01-01
depth (m) 85.0
depth_lower (m) 85.0
depth_upper (m) 85.0
description MM
diadchr (mg/m3) 0.0
diadchr_meth 2.2
diadino (mg/m3) 0.024
diadino_meth 2.2
diato (mg/m3) 0.0
diato_meth 2.2
dilution_used neat
dino (mg/m3) 0.0
dino_meth 2.2
dv_cphl_a (mg/m3) 0.0
dv_cphl_a_and_cphl_a (mg/m3) 0.664
dv_cphl_a_and_cphl_a_meth 2.2
dv_cphl_a_meth 2.2
dv_cphl_b (mg/m3) 0.0
dv_cphl_b_and_cphl_b (mg/m3) 0.029
dv_cphl_b_and_cphl_b_meth 2.2
dv_cphl_b_meth 2.2
echin (mg/m3) 0.0
echin_meth 2.2
env_broad_scale 7 Other
env_local_scale 7.2.1 Open ocean water-conservation
env_medium Sea water [ENVO_00002149]
facility RAMACIOTTI
flow_id AHWU6
folder_name 20171020_UNSW_EXTERNAL_BPAOPS364
fuco (mg/m3) 0.307
fuco_meth 2.2
funding_agency IMOS; CSIRO
general_env_feature Marine - neritic (coastal off shore)
geo_loc_name Australia:Maria Island
gyro (mg/m3) 0.0
gyro_meth 2.2
hex_fuco (mg/m3) 0.012
hex_fuco_meth 2.2
imos_site_code NRSMAI
keto_hex_fuco (mg/m3) 0.0
keto_hex_fuco_meth 2.2
lat_lon (decimal_degrees) -42.59667 148.23333
latitude (decimal_degrees) -42.59667
longitude (decimal_degrees) 148.23333
lut (mg/m3) 0.0
lut_meth 2.2
lyco (mg/m3) 0.0
lyco_meth 2.2
mg_dvp (mg/m3) 0.0
mg_dvp_meth 2.2
mm_amplicon_linkage AHWU6
myxo (mg/m3) 0.0
myxo_meth 2.2
neo (mg/m3) 0.003
neo_meth 2.2
nitrate (μmol/L) 5.2
nitrate_meth 2.2
nrs_sample_code NRSMAI20121017_085
nrs_trip_code MAI20121017
nucl_acid_ext 3.1.9
omics Genomics
oxygen (μmol/L) 269.2
oxygen_meth 2.2
pass_fail P
perid (mg/m3) 0.0
perid_meth 2.2
phide_a (mg/m3) 0.141
phide_a_meth 2.2
phosphate (μmol/L) 0.54
phosphate_meth 2.2
phytin_a (mg/m3) 0.122
phytin_a_meth 2.2
phytin_b (mg/m3) 0.0
phytin_b_meth 2.2
picoeukaryotes (cells/mL) 2761.5
picoeukaryotes_meth 2.2int
pras (mg/m3) 0.011
pras_meth 2.2
prochlorococcus (cells/mL) 2558.5
prochlorococcus_meth 2.2int
pyrophide_a (mg/m3) 0.0
pyrophide_a_meth 2.2
pyrophytin_a (mg/m3) 0.0
pyrophytin_a_meth 2.2
read_length 300bp
salinity_lab (PSU) 35.104
salinity_lab_meth 2.2
samp_collect_device 1.4
samp_mat_process 1.4
sample_attribution IMOS; CSIRO
sample_database_file AM_db_v2_202105131603.db
sample_extraction_id 27027_1
sample_id 102.100.100/27027
sample_metadata_ingest_date 2021-04-23_00:00:00
sample_metadata_ingest_file Curated_NRS_AM_CombinedWaterQuality_download090321_with_watercolumn120321_xlsx
sample_site_location_description Maria Island
sample_submission_date 2015-01-01
sample_submitter Jodie van de Kamp
sample_type Pelagic
secchi_depth (m) 13.0
secchi_depth_meth 2.2
silicate (μmol/L) 1.1
silicate_meth 2.2
source_mat_id 102.100.100/27027
store_cond 1.4
target A16S
ticket BPAOPS-364
tot_depth_water_col (m) 86.0
total_co2 (μmol/kg) 2102.57
total_co2_meth 2.2
url https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/27027
utc_date_sampled 2012-10-17
utc_time_sampled 23:52:00
viola (mg/m3) 0.0
viola_meth 2.2
zea (mg/m3) 0.0
zea_meth 2.2
zooplankton_biomass (mg/m3) 22.72084
zooplankton_biomass_meth 2.2int