Marine Microbes Metatranscriptome 102.100.100/34869

inshore reef_Geoffrey Bay, Metatranscriptome HiSeq

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Map tiles & Data by OpenStreetMap, under CC BY SA.
Resource Permissions organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members
am_environment Marine
analysis_software_version llumina bcl2fastq pipeline v 2.20.0.422
analytical_platform HiSeq
archive_ingestion_date 2019-03-15
coastal_id MI_CO_22.4.16_A1
collection_date 2016-04-22
data_generated 2019-03-15
data_type Metatranscriptome
dataset_url https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/metatranscriptome/agrf/BPAOPS-794/
date_of_transfer 2019-03-05
depth (m) 5.9
depth_lower (m) 5.9
depth_upper (m) 5.9
description MM
env_medium Sea water [ENVO_00002149]
facility AGRF
folder_name 20190305_AGRF_BPA_MM_CD4E3ANXX
insert_size_range 194.0
lat_lon (decimal_degrees) -19.154109 146.6426
latitude (decimal_degrees) -19.154109
library_construction_protocol TruSeq strand RNA w/ Dual Ribo-Zero (plant and bacteria)
longitude (decimal_degrees) 146.6426
omics metatranscriptomics
read_length 250bp
sample_extraction_id 34869_1
sample_id 102.100.100/34869
sample_metadata_ingest_date 2021-04-23_00:00:00
sample_metadata_ingest_file MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx
sample_site_location_description inshore reef_Geoffrey Bay
sample_submission_date 2019-03-05
sample_submitter Bettina Glasl
sample_type Sponge
sequencer HiSeq 2500
source_mat_id 102.100.100/34869
specific_host Coscinoderma matthewsi
ticket BPAOPS-794
url https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/34869
utc_date_sampled 2016-04-22
utc_time_sampled 10:00:00