Marine Microbes Metatranscriptome 102.100.100/37945
Dataset size is: 4.79 GiB
Data and Resources
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37945_1_PE_210bp_MM_AGRF_CC26CAN... Metadata Only FASTQ
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37945_1_PE_210bp_MM_AGRF_CC26CAN... Metadata Only FASTQ
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37945_1_PE_210bp_MM_AGRF_CC26CAN... Metadata Only FASTQ
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37945_1_PE_210bp_MM_AGRF_CC26CAN... Metadata Only FASTQ
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37945_1_PE_210bp_MM_AGRF_CC26CAN... Metadata Only FASTQ
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37945_1_PE_210bp_MM_AGRF_CC26CAN... Metadata Only FASTQ
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
| am_environment | Marine |
| analysis_software_version | bcl2fastq v2.20.0.422 |
| analytical_platform | HiSeq |
| archive_ingestion_date | 2017-12-21 |
| coastal_id | BI_CC_050416_3 |
| collection_date | 2016-04-05 |
| contextual_data_submission_date | 2017-11-15 |
| data_generated | 2017-12-21 |
| data_type | Metatranscriptome |
| dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/metatranscriptome/agrf/BPAOPS-471/ |
| depth (m) | 10.0 |
| depth_lower (m) | 10.0 |
| depth_upper (m) | 10.0 |
| description | MM |
| env_medium | Sea water [ENVO_00002149] |
| facility | AGRF |
| folder_name | 20170218_AGRF_BPA_MM_CC26CANXX |
| host_abundance (individuals/m2) | 1.0 |
| host_state | healthy |
| insert_size_range | 210bp |
| lat_lon (decimal_degrees) | -33.992034 151.232282 |
| latitude (decimal_degrees) | -33.992034 |
| library_construction_protocol | Ribo-Zero Plant/Bacteria and TruSeq stranded mRNA |
| longitude (decimal_degrees) | 151.232282 |
| omics | metatranscriptomics |
| read_length | 250bp |
| sample_extraction_id | 37945_1 |
| sample_id | 102.100.100/37945 |
| sample_metadata_ingest_date | 2021-04-23_00:00:00 |
| sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx |
| sample_site_location_description | Bare Island |
| sample_submitter | Jessica Taylor |
| sample_type | Sponge |
| sequencer | HiSeq 2503 |
| source_mat_id | 102.100.100/37945 |
| specific_host | Cymbastella concentrica |
| submitter | Jess Taylor |
| ticket | BPAOPS-471 |
| url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/37945 |
| utc_date_sampled | 2016-04-05 |
| utc_time_sampled | 14:30:00 |
| work_order | 20019 |