Marine Microbes Metatranscriptome 102.100.100/57520

Bare Island, Metatranscriptome HiSeq

Dataset size is: 4.79 GiB

Log in or Register to access resource
 
 

 

Data and Resources

This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Geospatial Coverage

Dataset extent

Map tiles & Data by OpenStreetMap, under CC BY SA.
Resource Permissions organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members
am_environment Marine
analysis_software_version bcl2fastq v2.20.0.422
analytical_platform HiSeq
archive_ingestion_date 2017-12-21
coastal_id BI_CC_150816_3
collection_date 2016-08-15
contextual_data_submission_date 2017-11-15
data_generated 2017-12-21
data_type Metatranscriptome
dataset_url https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/metatranscriptome/agrf/BPAOPS-471/
depth (m) 10.0
depth_lower (m) 10.0
depth_upper (m) 10.0
env_medium Saline water
facility AGRF
folder_name 20170218_AGRF_BPA_MM_CC26CANXX
host_abundance (individuals/m2) 1.0
host_state healthy
insert_size_range 210bp
lat_lon (decimal_degrees) -33.992034 151.232282
latitude (decimal_degrees) -33.992034
library_construction_protocol Ribo-Zero Plant/Bacteria and TruSeq stranded mRNA
longitude (decimal_degrees) 151.232282
omics metatranscriptomics
read_length 250bp
sample_extraction_id 57520_1
sample_id 102.100.100/57520
sample_metadata_ingest_date 2021-03-05
sample_metadata_ingest_file MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_xlsx
sample_site_location_description Bare Island
sample_submitter Jessica Taylor
sample_type Sponge
sequencer HiSeq 2515
source_mat_id 102.100.100/57520
specific_host Cymbastella concentrica
submitter Jess Taylor
ticket BPAOPS-471
url https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/57520
utc_date_sampled 2016-08-15
utc_time_sampled 14:30:00
work_order 20019