Marine Microbes Metatranscriptome 102.100.100/58149
Dataset size is: 5.32 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
| am_environment | Marine |
| analysis_software_version | 1.8.2 |
| analytical_platform | HiSeq |
| archive_ingestion_date | 2018-04-19 |
| coastal_id | CB_SL_040417_3_D |
| collection_date | 2017-04-04 |
| data_generated | 2018-04-19 |
| data_type | fastQ |
| dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/metagenomics/agrf/BPAOPS-584/ |
| date_of_transfer | 2018-04-12 |
| depth (m) | 2.0 |
| depth_lower (m) | 2.0 |
| depth_upper (m) | 2.0 |
| env_medium | Saline water |
| facility | AGRF |
| folder_name | 20180412_AGRF_BPA_MM_CCADVANXX |
| geo_loc_name | Australia: Sydney |
| insert_size_range | 480bp |
| lat_lon (decimal_degrees) | -33.826017 151.262931 |
| latitude (decimal_degrees) | -33.826017 |
| library_construction_protocol | TruSeq Total RNA |
| longitude (decimal_degrees) | 151.262931 |
| omics | metatranscriptomics |
| read_length | 250bp |
| sample_extraction_id | 58149_1 |
| sample_id | 102.100.100/58149 |
| sample_metadata_ingest_date | 2021-03-05 |
| sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_xlsx |
| sample_site_location_description | Cobbler Beach |
| sample_submission_date | 2018-04-12 |
| sample_type | Seagrass |
| sequencer | HiSeq 2500 |
| source_mat_id | 102.100.100/58149 |
| specific_host | Zostera muelleri |
| ticket | BPAOPS-584 |
| url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/58149 |
| utc_date_sampled | 2017-04-04 |
| utc_time_sampled | 09:00:00 |