Phylogenomics, exon capture
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Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:365:omg-consortium-members |
| Access Control Date | 2019-02-02 |
| Access Control Mode | date |
| Sequence Data Type | illumina-exoncapture |
| archive_ingestion_date | 2018-02-02 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/omg_staging/exon_capture/brf/BPAOPS-508/ |
| bpa_dataset_id | 102.100.100/52584 |
| bpa_library_id | 102.100.100/52878 |
| bpa_sample_id | 102.100.100/40256 |
| bpa_work_order | 40010 |
| data_custodian | Mark Eldridge |
| data_generated | 2018-02-02 |
| data_type | Illumina FASTQ |
| dataset_url | https://data.bioplatforms.com/organization/dbaf22b0-0e9b-4b14-b405-9fc4d9181975?q=BPAOPS-508&sort=score+desc%2C+metadata_modified+desc |
| date_of_transfer | 2018-02-02 |
| description | HiSeq 2500 100bp PE - exon capture marsupial |
| dna_treatment | NA |
| experimental_design | Nimblegen Exon Capture - single index - marsupial V1 |
| facility | brf |
| facility_sample_id | 52878_AH5VVVBCX2_CTGCGAC |
| file | 52878_AH5VVVBCX2_CTGCGAC_S57_R1_001.fastq.gz | 52878_AH5VVVBCX2_CTGCGAC_S57_R2_001.fastq.gz |
| flowcell_id | AH5VVVBCX2 |
| folder_name | SN877_0531_AMacDonald_OzMammals_Marsupials_gDNA_capture |
| library_comments | NA |
| library_location | ANU EBL |
| library_ng_ul | 25.4018197142 |
| library_pcr_cycles | 14.0 |
| library_pcr_reps | 2.0 |
| library_prep_date | 2017-11-09 |
| library_prep_method | Meyer and Kircher protocol |
| library_prepared_by | Anna MacDonald |
| library_status | Data available |
| library_type | exon capture |
| n_libraries_pooled | 96 |
| omg_project | Phylogenomics |
| p7_library_index_id | 57.0 |
| p7_library_index_sequence | CTGCGAC |
| p7_library_oligo_sequence | CAAGCAGAAGACGGCATACGAGATgtcgcagGTGACTGGAGTTCAGACGTGT |
| sample_submission_date | 2018-02-02 |
| sequence_length | 100bp PE |
| sequencing_facility | BRF |
| sequencing_platform | Illumina HiSeq 2500 RAPID |
| software_version | unknown |
| ticket | BPAOPS-508 |