Plant Pathogen, None, Illumina Shortread, Sample ID 395310
Dataset size is: 0.00 Bit
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Data Policy
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:pp-prj035 |
| Access Control Date | 2024-09-10 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq Control Software (NCS) v1.1.0.18335; Real Time Analysis (RTA) v4.6.2; Illumina DRAGEN BCL Convert 07.021.645.4.0.3 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/pp_staging/illumina-shortread/BPAOPS-1472/20230911_PP_AGRF_CAGRF230615177_22CFFJLT3/ |
| bioplatforms_dataset_id | 102.100.100/399032 |
| bioplatforms_library_id | 102.100.100/397564 |
| bioplatforms_project | Plant Pathogen Initiative |
| bioplatforms_project_code | PP035_Ptf_teres |
| bioplatforms_sample_id | 102.100.100/395310 |
| ccg_jira_ticket | BPAOPS-1472 |
| data_type | Illumina short read |
| date_of_transfer | 2023-09-11 |
| date_of_transfer_to_archive | 2023-09-12 |
| description | Illumina short read |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1472 |
| facility | AGRF |
| facility_project_code | CAGRF230615177 |
| facility_sample_id | 14501-56 |
| flowcell_id | 22CFFJLT3 |
| flowcell_type | 10B-300 |
| folder_name | 20230911_PP_AGRF_CAGRF230615177_22CFFJLT3 |
| insert_size_range | 350 ± 100 bp |
| library_construction_protocol | IDT xGen cfDNA & FFPE Library Preperation |
| library_id | 397564 |
| library_index_id | IDT8_i7_56 & IDT8_i5_56 |
| library_index_sequence | GAAGTTGG-GTTGTTCG |
| library_layout | Paired-End |
| library_location | AGRF Melbourne |
| library_ng_ul | 49.5 |
| library_pcr_cycles | 7 |
| library_prep_date | 2023-08-23 |
| library_prepared_by | Shan Zong |
| library_selection | Duplex UMI with Adapter Ligation of DNA |
| library_source | DNA |
| library_strategy | Whole-genome Sequencing |
| library_type | WGS |
| scientific_name | Pyrenophora teres f. teres - no metadata |
| sequencing_facility | AGRF |
| sequencing_model | X Plus |
| sequencing_platform | NovaSeq |
| ticket | BPAOPS-1472 |
| work_order | WO20022 |