PPA, Proteomics, Data Independent Acquisition (DIA), Dataset ID: 453290, Raw Data
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:ppa-consortium-members |
| Access Control Date | 2025-09-13 |
| Access Control Mode | date |
| Sequence Data Type | proteomics |
| acquisition_mode_fragmentation | DIA |
| analytical_platform | Mass Spectrometer |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/ppa_staging/proteomics-raw/BPAOPS-1683/20240913_PPA_UNISA_453271/ |
| bioplatforms_dataset_id | 102.100.100/453290 |
| bioplatforms_project | Plant Protein Atlas (PPA) |
| class | Magnoliopsida |
| collector | Ruwan Lenorage, SARDI |
| common_name | Faba bean, fava bean |
| country | Australia |
| data_context | Data Independent Acquisition (DIA) |
| data_type | TEST |
| date_of_transfer | 2024-09-13 |
| date_of_transfer_to_archive | 2024-09-20 |
| description | Proteomics DIA raw data |
| experiment_type | Field trial |
| facility | UniSA |
| facility_project_code | PI00181 |
| family | Fabaceae |
| file_description | .timeseried.data/ .wiff/ .wiff2/ .wiff.scan |
| genus | Vicia |
| gradient_time | 35 min/ 3% - 35% B/ 5 ul/min |
| initiative_code | PPA |
| lc_column_type | Waters ACQUITY UPLC M-Class System (LC). Waters nanoEase M/Z HSS T3 1.8um, 300um x 150 mm (Column) |
| metadata_revision_date | 2023-10-27 |
| metadata_revision_filename | Sample_ID_Faba_bean_2023-06-15_120_samples_forQCIF.xlsx |
| omics | Proteomics |
| order | Fabales |
| phylum | Streptophyta |
| planting_season | 2022 |
| proteomics_facility | Mass Spectrometry and Proteomics, University of South Australia |
| raw_or_analysed_data | Raw Data |
| sample_collection_type | Field trial |
| sample_fractionation | none |
| sample_on_column | 0.4 |
| sample_type | Mature grain |
| scientific_name | Vicia Faba |
| species | faba |
| specimen_custodian | SARDI_Dr Lachlan Lake (field trial), SARDI_Dr Julie Hayes (prepared samples) |
| taxon_id | 3906 |
| taxonomic_group | Plant |
| ticket | BPAOPS-1683 |
| tissue | Mechanically de-hulled grain pieces (transcriptome), mechanically de-hulled and finely milled grain (proteome, metabolome, fibre) |
| tissue_preservation | Snap frozen (transcriptome, metabolome) |
| tissue_preservation_temperature | -80°C (transcriptome, metabolome), 4°C (proteome, fibre) |
| variety_commercial | Y |
| wild_captive | Cultivated |